Coordinates Class

Member Function Documentation

Coordinates::Coordinates(int index_start = -1, int index_end = -1)

Constructs a Coordinates object with index_start and index_end indices.

The indices define a region in the Sequence. They are sorted so as to ensure that index_start <= index_end.

Coordinates::Coordinates(const Coordinates &other)

Constructs a Coordinates object as a copy of other.

After assigning other to this Coordinates, the indices are sorted so as to ensure that index_start <= index_end.

[noexcept] Coordinates::~Coordinates()

Destructs this Coordinates instance.

int Coordinates::end() const

Returns the member end index.

See also setEnd().

void Coordinates::incrementEnd()

Increments by one unit the member end index.

QString Coordinates::indicesAsText() const

Returns a string with the region described by this Coordinates instance.

The values are the member indices and the format is

[125--259]

int Coordinates::length() const

Returns the number of monomer codes in the region described by this Coordinates instance.

return (m_end - m_start + 1)

QString Coordinates::positionsAsText() const

Returns a string with the region described by this Coordinates instance.

The values are the member indices incremented by one unit (thus being positions and not indices) and the format is

[126--260]

void Coordinates::reset()

Resets the member indices to 0.

void Coordinates::setEnd(int value)

Set the end index to value.

Ensures that m_start is <= m_end.

See also end().

void Coordinates::setStart(int value)

Set the start index to value.

Ensures that m_start is <= m_end.

See also start().

int Coordinates::start() const

Returns the member start index.

See also setStart().